Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcp4P63054 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pcp4P63054 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcp4P63054 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Pcp4P63054 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.52□□□□□ -0.73
Pcp4P63054 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.52□□□□□ -0.73
Pcp4P63054 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcp4P63054 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcp4P63054 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcp4P63054 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.51□□□□□ -0.73
Pcp4P63054 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pcp4P63054 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
Pcp4P63054 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.51□□□□□ -0.73
Pcp4P63054 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pcp4P63054 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.51□□□□□ -0.73
Pcp4P63054 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pcp4P63054 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.51□□□□□ -0.73
Pcp4P63054 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcp4P63054 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Pcp4P63054 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Pcp4P63054 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Pcp4P63054 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcp4P63054 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcp4P63054 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pcp4P63054 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pcp4P63054 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pcp4P63054 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pcp4P63054 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcp4P63054 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms