Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Lsm3P62311 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lsm3P62311 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lsm3P62311 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.29□□□□□ -0.12
Lsm3P62311 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.29□□□□□ -0.12
Lsm3P62311 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.29□□□□□ -0.12
Lsm3P62311 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.29□□□□□ -0.12
Lsm3P62311 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.29□□□□□ -0.12
Lsm3P62311 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lsm3P62311 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm3P62311 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.28□□□□□ -0.12
Lsm3P62311 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lsm3P62311 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.28□□□□□ -0.12
Lsm3P62311 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lsm3P62311 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.28□□□□□ -0.12
Lsm3P62311 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.28□□□□□ -0.12
Lsm3P62311 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.28□□□□□ -0.12
Lsm3P62311 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Lsm3P62311 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lsm3P62311 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm3P62311 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lsm3P62311 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Lsm3P62311 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm3P62311 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.27□□□□□ -0.12
Lsm3P62311 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm3P62311 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm3P62311 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.27□□□□□ -0.12
Lsm3P62311 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm3P62311 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm3P62311 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm3P62311 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Lsm3P62311 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.27□□□□□ -0.12
Lsm3P62311 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm3P62311 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm3P62311 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm3P62311 Gm13158-201ENSMUST00000122007 736 ntBASIC14.27□□□□□ -0.13
Lsm3P62311 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.27□□□□□ -0.13
Lsm3P62311 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Lsm3P62311 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm3P62311 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lsm3P62311 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm3P62311 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms