Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Cks1bP61025 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.15□□□□□ -0.62
Cks1bP61025 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cks1bP61025 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.15□□□□□ -0.62
Cks1bP61025 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Cks1bP61025 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.15□□□□□ -0.63
Cks1bP61025 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cks1bP61025 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cks1bP61025 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cks1bP61025 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Cks1bP61025 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cks1bP61025 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.14□□□□□ -0.63
Cks1bP61025 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cks1bP61025 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cks1bP61025 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Cks1bP61025 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cks1bP61025 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cks1bP61025 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.14□□□□□ -0.63
Cks1bP61025 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.14□□□□□ -0.63
Cks1bP61025 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Gm18958-201ENSMUST00000174258 762 ntBASIC11.14□□□□□ -0.63
Cks1bP61025 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.14□□□□□ -0.63
Cks1bP61025 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Cks1bP61025 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cks1bP61025 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cks1bP61025 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.14□□□□□ -0.63
Cks1bP61025 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1bP61025 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.13□□□□□ -0.63
Cks1bP61025 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.13□□□□□ -0.63
Cks1bP61025 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cks1bP61025 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1bP61025 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.13□□□□□ -0.63
Cks1bP61025 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.13□□□□□ -0.63
Cks1bP61025 Gm37179-201ENSMUST00000194862 823 ntBASIC11.13□□□□□ -0.63
Cks1bP61025 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms