Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sf3b6P59708 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b6P59708 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.88□□□□□ -0.19
Sf3b6P59708 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.88□□□□□ -0.19
Sf3b6P59708 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b6P59708 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b6P59708 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Sf3b6P59708 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.87□□□□□ -0.19
Sf3b6P59708 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.87□□□□□ -0.19
Sf3b6P59708 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Gm10231-201ENSMUST00000181584 441 ntBASIC13.87□□□□□ -0.19
Sf3b6P59708 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Gm10175-202ENSMUST00000208752 441 ntBASIC13.87□□□□□ -0.19
Sf3b6P59708 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.87□□□□□ -0.19
Sf3b6P59708 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.87□□□□□ -0.19
Sf3b6P59708 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sf3b6P59708 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b6P59708 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Sybu-209ENSMUST00000228639 4113 ntBASIC13.86□□□□□ -0.19
Sf3b6P59708 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Sf3b6P59708 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.86□□□□□ -0.19
Sf3b6P59708 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sf3b6P59708 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sf3b6P59708 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sf3b6P59708 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.86□□□□□ -0.19
Sf3b6P59708 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b6P59708 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.85□□□□□ -0.19
Sf3b6P59708 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sf3b6P59708 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.85□□□□□ -0.19
Sf3b6P59708 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sf3b6P59708 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.85□□□□□ -0.19
Sf3b6P59708 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sf3b6P59708 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.85□□□□□ -0.19
Sf3b6P59708 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b6P59708 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sf3b6P59708 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.84□□□□□ -0.19
Sf3b6P59708 Gm12134-201ENSMUST00000122109 520 ntBASIC13.84□□□□□ -0.19
Sf3b6P59708 Gm6257-201ENSMUST00000163864 910 ntBASIC13.84□□□□□ -0.19
Sf3b6P59708 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Sf3b6P59708 Mir6404-201ENSMUST00000183699 94 ntBASIC13.84□□□□□ -0.19
Sf3b6P59708 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.84□□□□□ -0.19
Sf3b6P59708 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.84□□□□□ -0.19
Sf3b6P59708 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.84□□□□□ -0.19
Sf3b6P59708 Gm7213-201ENSMUST00000215977 950 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms