Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tpm1P58771 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tpm1P58771 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
Tpm1P58771 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.45■□□□□ 0.38
Tpm1P58771 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.45■□□□□ 0.38
Tpm1P58771 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.44■□□□□ 0.38
Tpm1P58771 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.44■□□□□ 0.38
Tpm1P58771 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm1P58771 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.43■□□□□ 0.38
Tpm1P58771 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.43■□□□□ 0.38
Tpm1P58771 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.43■□□□□ 0.38
Tpm1P58771 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.43■□□□□ 0.38
Tpm1P58771 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.43■□□□□ 0.38
Tpm1P58771 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Tpm1P58771 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm1P58771 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tpm1P58771 BC037039-201ENSMUST00000192003 2205 ntBASIC17.42■□□□□ 0.38
Tpm1P58771 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.42■□□□□ 0.38
Tpm1P58771 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.42■□□□□ 0.38
Tpm1P58771 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.42■□□□□ 0.38
Tpm1P58771 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tpm1P58771 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm1P58771 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Tpm1P58771 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.41■□□□□ 0.38
Tpm1P58771 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.41■□□□□ 0.38
Tpm1P58771 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tpm1P58771 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tpm1P58771 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm1P58771 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tpm1P58771 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.4■□□□□ 0.38
Tpm1P58771 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Tpm1P58771 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.4■□□□□ 0.38
Tpm1P58771 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms