Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ctdsp1P58466 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Actl10-202ENSMUST00000226583 1501 ntBASIC12.23□□□□□ -0.45
Ctdsp1P58466 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.23□□□□□ -0.45
Ctdsp1P58466 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Mtag2-201ENSMUST00000058665 714 ntBASIC12.23□□□□□ -0.45
Ctdsp1P58466 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.23□□□□□ -0.45
Ctdsp1P58466 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.23□□□□□ -0.45
Ctdsp1P58466 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Gm15375-201ENSMUST00000119510 849 ntBASIC12.22□□□□□ -0.45
Ctdsp1P58466 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Gm43017-201ENSMUST00000198296 752 ntBASIC12.22□□□□□ -0.45
Ctdsp1P58466 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Gm6139-201ENSMUST00000079261 882 ntBASIC12.22□□□□□ -0.45
Ctdsp1P58466 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ctdsp1P58466 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ctdsp1P58466 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ctdsp1P58466 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ctdsp1P58466 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Ctdsp1P58466 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ctdsp1P58466 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.21□□□□□ -0.45
Ctdsp1P58466 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ctdsp1P58466 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms