Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sssca1P56873 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.64□□□□□ -0.39
Sssca1P56873 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Gm7729-201ENSMUST00000050143 801 ntBASIC12.64□□□□□ -0.39
Sssca1P56873 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sssca1P56873 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sssca1P56873 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.64□□□□□ -0.39
Sssca1P56873 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sssca1P56873 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.63□□□□□ -0.39
Sssca1P56873 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.63□□□□□ -0.39
Sssca1P56873 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.63□□□□□ -0.39
Sssca1P56873 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.63□□□□□ -0.39
Sssca1P56873 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sssca1P56873 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.63□□□□□ -0.39
Sssca1P56873 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.63□□□□□ -0.39
Sssca1P56873 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Sssca1P56873 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.63□□□□□ -0.39
Sssca1P56873 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Sssca1P56873 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.63□□□□□ -0.39
Sssca1P56873 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sssca1P56873 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Sssca1P56873 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sssca1P56873 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.63□□□□□ -0.39
Sssca1P56873 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.63□□□□□ -0.39
Sssca1P56873 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sssca1P56873 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sssca1P56873 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sssca1P56873 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.62□□□□□ -0.39
Sssca1P56873 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sssca1P56873 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sssca1P56873 Gm27389-201ENSMUST00000183622 195 ntBASIC12.62□□□□□ -0.39
Sssca1P56873 Gm37055-201ENSMUST00000191866 133 ntBASIC12.62□□□□□ -0.39
Sssca1P56873 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.62□□□□□ -0.39
Sssca1P56873 Gm44430-201ENSMUST00000203376 995 ntBASIC12.62□□□□□ -0.39
Sssca1P56873 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.62□□□□□ -0.39
Sssca1P56873 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sssca1P56873 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.62□□□□□ -0.39
Sssca1P56873 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sssca1P56873 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sssca1P56873 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Sssca1P56873 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sssca1P56873 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.61□□□□□ -0.39
Sssca1P56873 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Sssca1P56873 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sssca1P56873 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms