Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CckbrP56481 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CckbrP56481 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.46□□□□□ -0.09
CckbrP56481 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Gm8097-201ENSMUST00000117903 829 ntBASIC14.46□□□□□ -0.09
CckbrP56481 Gm8344-201ENSMUST00000119813 856 ntBASIC14.46□□□□□ -0.09
CckbrP56481 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.46□□□□□ -0.09
CckbrP56481 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.46□□□□□ -0.09
CckbrP56481 Gm18622-201ENSMUST00000219361 595 ntBASIC14.46□□□□□ -0.09
CckbrP56481 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.46□□□□□ -0.09
CckbrP56481 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CckbrP56481 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CckbrP56481 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CckbrP56481 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.1
CckbrP56481 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CckbrP56481 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CckbrP56481 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CckbrP56481 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CckbrP56481 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CckbrP56481 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CckbrP56481 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.45□□□□□ -0.1
CckbrP56481 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.45□□□□□ -0.1
CckbrP56481 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.45□□□□□ -0.1
CckbrP56481 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.45□□□□□ -0.1
CckbrP56481 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CckbrP56481 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.45□□□□□ -0.1
CckbrP56481 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.45□□□□□ -0.1
CckbrP56481 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CckbrP56481 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.45□□□□□ -0.1
CckbrP56481 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Rps4l-201ENSMUST00000071745 943 ntBASIC14.45□□□□□ -0.1
CckbrP56481 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CckbrP56481 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.45□□□□□ -0.1
CckbrP56481 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CckbrP56481 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CckbrP56481 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
CckbrP56481 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
CckbrP56481 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CckbrP56481 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CckbrP56481 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CckbrP56481 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CckbrP56481 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CckbrP56481 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CckbrP56481 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CckbrP56481 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CckbrP56481 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CckbrP56481 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CckbrP56481 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CckbrP56481 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms