Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Nub1P54729 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nub1P54729 Gm8097-201ENSMUST00000117903 829 ntBASIC16.79■□□□□ 0.28
Nub1P54729 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.79■□□□□ 0.28
Nub1P54729 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Nub1P54729 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.79■□□□□ 0.28
Nub1P54729 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.79■□□□□ 0.28
Nub1P54729 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nub1P54729 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nub1P54729 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Nub1P54729 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Nub1P54729 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Nub1P54729 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.78■□□□□ 0.28
Nub1P54729 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.78■□□□□ 0.28
Nub1P54729 Gm8655-201ENSMUST00000221159 852 ntBASIC16.78■□□□□ 0.28
Nub1P54729 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nub1P54729 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nub1P54729 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.77■□□□□ 0.28
Nub1P54729 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Nub1P54729 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Nub1P54729 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nub1P54729 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nub1P54729 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nub1P54729 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nub1P54729 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.77■□□□□ 0.28
Nub1P54729 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nub1P54729 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nub1P54729 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.77■□□□□ 0.28
Nub1P54729 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nub1P54729 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.77■□□□□ 0.28
Nub1P54729 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nub1P54729 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nub1P54729 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nub1P54729 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nub1P54729 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nub1P54729 Prob1-201ENSMUST00000097619 3021 ntBASIC16.76■□□□□ 0.27
Nub1P54729 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.76■□□□□ 0.27
Nub1P54729 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.76■□□□□ 0.27
Nub1P54729 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.76■□□□□ 0.27
Nub1P54729 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.76■□□□□ 0.27
Nub1P54729 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nub1P54729 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nub1P54729 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nub1P54729 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nub1P54729 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.76■□□□□ 0.27
Nub1P54729 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nub1P54729 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nub1P54729 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.75■□□□□ 0.27
Nub1P54729 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.75■□□□□ 0.27
Nub1P54729 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nub1P54729 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms