Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.88■□□□□ 0.13
Sox1P53783 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.88■□□□□ 0.13
Sox1P53783 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.87■□□□□ 0.13
Sox1P53783 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.87■□□□□ 0.13
Sox1P53783 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sox1P53783 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sox1P53783 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.87■□□□□ 0.13
Sox1P53783 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.87■□□□□ 0.13
Sox1P53783 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sox1P53783 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.87■□□□□ 0.13
Sox1P53783 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.87■□□□□ 0.13
Sox1P53783 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.87■□□□□ 0.13
Sox1P53783 Gm45331-201ENSMUST00000209868 554 ntBASIC15.87■□□□□ 0.13
Sox1P53783 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.87■□□□□ 0.13
Sox1P53783 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.87■□□□□ 0.13
Sox1P53783 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Sox1P53783 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sox1P53783 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sox1P53783 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox1P53783 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sox1P53783 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Sox1P53783 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.86■□□□□ 0.13
Sox1P53783 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.86■□□□□ 0.13
Sox1P53783 Mir3102-201ENSMUST00000175555 104 ntBASIC15.86■□□□□ 0.13
Sox1P53783 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.86■□□□□ 0.13
Sox1P53783 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.86■□□□□ 0.13
Sox1P53783 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.86■□□□□ 0.13
Sox1P53783 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Sox1P53783 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sox1P53783 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox1P53783 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Sox1P53783 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.85■□□□□ 0.13
Sox1P53783 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.85■□□□□ 0.13
Sox1P53783 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Sox1P53783 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Sox1P53783 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.85■□□□□ 0.13
Sox1P53783 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Sox1P53783 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.85■□□□□ 0.13
Sox1P53783 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Sox1P53783 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.85■□□□□ 0.13
Sox1P53783 Gm2810-201ENSMUST00000118681 990 ntBASIC15.85■□□□□ 0.13
Sox1P53783 Gm11425-201ENSMUST00000119608 498 ntBASIC15.85■□□□□ 0.13
Sox1P53783 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.85■□□□□ 0.13
Sox1P53783 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.85■□□□□ 0.13
Sox1P53783 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Sox1P53783 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Gm17150-201ENSMUST00000165577 381 ntBASIC15.85■□□□□ 0.13
Sox1P53783 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Gm9396-201ENSMUST00000076703 567 ntBASIC15.85■□□□□ 0.13
Sox1P53783 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.85■□□□□ 0.13
Sox1P53783 Gm10154-201ENSMUST00000084445 354 ntBASIC15.85■□□□□ 0.13
Sox1P53783 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.85■□□□□ 0.13
Sox1P53783 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Sox1P53783 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox1P53783 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Sox1P53783 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Sox1P53783 Gm24694-201ENSMUST00000180054 110 ntBASIC15.84■□□□□ 0.13
Sox1P53783 Gm27663-201ENSMUST00000184839 110 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms