Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox2P48432 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox2P48432 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.65□□□□□ -0.06
Sox2P48432 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox2P48432 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.65□□□□□ -0.06
Sox2P48432 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox2P48432 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox2P48432 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
Sox2P48432 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox2P48432 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Sox2P48432 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Sox2P48432 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox2P48432 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sox2P48432 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sox2P48432 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sox2P48432 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Sox2P48432 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox2P48432 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sox2P48432 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.63□□□□□ -0.07
Sox2P48432 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sox2P48432 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.63□□□□□ -0.07
Sox2P48432 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.63□□□□□ -0.07
Sox2P48432 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
Sox2P48432 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox2P48432 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox2P48432 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sox2P48432 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.62□□□□□ -0.07
Sox2P48432 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Sox2P48432 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms