Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.18□□□□□ -0.78
Xcl1P47993 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Xcl1P47993 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Xcl1P47993 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC10.18□□□□□ -0.78
Xcl1P47993 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC10.18□□□□□ -0.78
Xcl1P47993 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Xcl1P47993 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC10.18□□□□□ -0.78
Xcl1P47993 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC10.18□□□□□ -0.78
Xcl1P47993 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC10.18□□□□□ -0.78
Xcl1P47993 CT010467.1-202ENSMUST00000205406 714 ntBASIC10.18□□□□□ -0.78
Xcl1P47993 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Gm5921-201ENSMUST00000075898 882 ntBASIC10.18□□□□□ -0.78
Xcl1P47993 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Xcl1P47993 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC10.18□□□□□ -0.78
Xcl1P47993 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Xcl1P47993 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.18□□□□□ -0.78
Xcl1P47993 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Xcl1P47993 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Xcl1P47993 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.18□□□□□ -0.78
Xcl1P47993 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Xcl1P47993 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC10.17□□□□□ -0.78
Xcl1P47993 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Xcl1P47993 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Xcl1P47993 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Xcl1P47993 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC10.17□□□□□ -0.78
Xcl1P47993 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC10.17□□□□□ -0.78
Xcl1P47993 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC10.17□□□□□ -0.78
Xcl1P47993 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC10.17□□□□□ -0.78
Xcl1P47993 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Xcl1P47993 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC10.17□□□□□ -0.78
Xcl1P47993 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Xcl1P47993 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Xcl1P47993 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.17□□□□□ -0.78
Xcl1P47993 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Xcl1P47993 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Xcl1P47993 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.17□□□□□ -0.78
Xcl1P47993 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Xcl1P47993 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Xcl1P47993 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC10.16□□□□□ -0.78
Xcl1P47993 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.16□□□□□ -0.78
Xcl1P47993 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.16□□□□□ -0.78
Xcl1P47993 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Xcl1P47993 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms