Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Gm25911-201ENSMUST00000157621 56 ntBASIC14.74□□□□□ -0.05
Nkx2-6P43688 Gm18489-201ENSMUST00000172565 551 ntBASIC14.74□□□□□ -0.05
Nkx2-6P43688 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Gm19164-201ENSMUST00000210667 640 ntBASIC14.74□□□□□ -0.05
Nkx2-6P43688 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-6P43688 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.73□□□□□ -0.05
Nkx2-6P43688 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.73□□□□□ -0.05
Nkx2-6P43688 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.73□□□□□ -0.05
Nkx2-6P43688 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.73□□□□□ -0.05
Nkx2-6P43688 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-6P43688 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.72□□□□□ -0.05
Nkx2-6P43688 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.72□□□□□ -0.05
Nkx2-6P43688 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.72□□□□□ -0.05
Nkx2-6P43688 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.72□□□□□ -0.05
Nkx2-6P43688 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx2-6P43688 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-6P43688 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Nkx2-6P43688 Gm45167-201ENSMUST00000208007 322 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms