Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.52■□□□□ 0.4
Sdc2P43407 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.52■□□□□ 0.4
Sdc2P43407 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Sdc2P43407 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.52■□□□□ 0.4
Sdc2P43407 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.52■□□□□ 0.4
Sdc2P43407 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.52■□□□□ 0.4
Sdc2P43407 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc2P43407 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc2P43407 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Sdc2P43407 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc2P43407 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc2P43407 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc2P43407 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc2P43407 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc2P43407 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc2P43407 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Sdc2P43407 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sdc2P43407 Gm13312-201ENSMUST00000119631 718 ntBASIC17.51■□□□□ 0.39
Sdc2P43407 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.51■□□□□ 0.39
Sdc2P43407 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Mir7071-201ENSMUST00000184847 69 ntBASIC17.51■□□□□ 0.39
Sdc2P43407 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sdc2P43407 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Sdc2P43407 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.51■□□□□ 0.39
Sdc2P43407 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sdc2P43407 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc2P43407 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Sdc2P43407 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sdc2P43407 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.5■□□□□ 0.39
Sdc2P43407 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.5■□□□□ 0.39
Sdc2P43407 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 BC037039-201ENSMUST00000192003 2205 ntBASIC17.5■□□□□ 0.39
Sdc2P43407 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 AA414768-201ENSMUST00000121924 1257 ntBASIC17.5■□□□□ 0.39
Sdc2P43407 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.5■□□□□ 0.39
Sdc2P43407 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.5■□□□□ 0.39
Sdc2P43407 Gm6659-201ENSMUST00000174752 547 ntBASIC17.5■□□□□ 0.39
Sdc2P43407 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sdc2P43407 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sdc2P43407 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc2P43407 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Sdc2P43407 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.49■□□□□ 0.39
Sdc2P43407 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sdc2P43407 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Gm25406-201ENSMUST00000157599 105 ntBASIC17.49■□□□□ 0.39
Sdc2P43407 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sdc2P43407 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc2P43407 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.49■□□□□ 0.39
Sdc2P43407 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms