Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Abca1P41233 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.97□□□□□ -0.33
Abca1P41233 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.96□□□□□ -0.33
Abca1P41233 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.96□□□□□ -0.33
Abca1P41233 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.96□□□□□ -0.33
Abca1P41233 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.96□□□□□ -0.33
Abca1P41233 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Abca1P41233 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.96□□□□□ -0.33
Abca1P41233 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Abca1P41233 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Abca1P41233 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Abca1P41233 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Abca1P41233 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.96□□□□□ -0.33
Abca1P41233 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Abca1P41233 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Abca1P41233 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Abca1P41233 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Abca1P41233 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.96□□□□□ -0.34
Abca1P41233 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Abca1P41233 Gm27646-201ENSMUST00000183989 110 ntBASIC12.96□□□□□ -0.34
Abca1P41233 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Abca1P41233 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Abca1P41233 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.34
Abca1P41233 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Abca1P41233 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Abca1P41233 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Abca1P41233 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.96□□□□□ -0.34
Abca1P41233 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Abca1P41233 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.95□□□□□ -0.34
Abca1P41233 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.95□□□□□ -0.34
Abca1P41233 Gm44872-201ENSMUST00000207864 420 ntBASIC12.95□□□□□ -0.34
Abca1P41233 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.95□□□□□ -0.34
Abca1P41233 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.95□□□□□ -0.34
Abca1P41233 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.95□□□□□ -0.34
Abca1P41233 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Abca1P41233 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Abca1P41233 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Abca1P41233 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.95□□□□□ -0.34
Abca1P41233 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Abca1P41233 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.95□□□□□ -0.34
Abca1P41233 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Abca1P41233 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Abca1P41233 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.95□□□□□ -0.34
Abca1P41233 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.94□□□□□ -0.34
Abca1P41233 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.94□□□□□ -0.34
Abca1P41233 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.94□□□□□ -0.34
Abca1P41233 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.94□□□□□ -0.34
Abca1P41233 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Abca1P41233 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Abca1P41233 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms