Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Cdh4P39038 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cdh4P39038 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdh4P39038 Gm8344-201ENSMUST00000119813 856 ntBASIC14.92□□□□□ -0.02
Cdh4P39038 Gm7862-201ENSMUST00000121461 292 ntBASIC14.92□□□□□ -0.02
Cdh4P39038 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.92□□□□□ -0.02
Cdh4P39038 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.92□□□□□ -0.02
Cdh4P39038 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.92□□□□□ -0.02
Cdh4P39038 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdh4P39038 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.92□□□□□ -0.02
Cdh4P39038 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdh4P39038 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdh4P39038 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cdh4P39038 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdh4P39038 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdh4P39038 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cdh4P39038 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Gm25990-201ENSMUST00000102440 86 ntBASIC14.91□□□□□ -0.02
Cdh4P39038 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cdh4P39038 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.91□□□□□ -0.02
Cdh4P39038 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Gm18195-201ENSMUST00000207604 706 ntBASIC14.91□□□□□ -0.02
Cdh4P39038 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Cdh4P39038 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.91□□□□□ -0.02
Cdh4P39038 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.91□□□□□ -0.02
Cdh4P39038 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Cdh4P39038 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Cdh4P39038 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh4P39038 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cdh4P39038 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Gm11780-201ENSMUST00000136880 516 ntBASIC14.9□□□□□ -0.02
Cdh4P39038 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.9□□□□□ -0.02
Cdh4P39038 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.9□□□□□ -0.02
Cdh4P39038 Mzt1-203ENSMUST00000227948 952 ntBASIC14.9□□□□□ -0.02
Cdh4P39038 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh4P39038 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms