Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LdlrP35951 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.54■□□□□ 0.08
LdlrP35951 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.54■□□□□ 0.08
LdlrP35951 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.54■□□□□ 0.08
LdlrP35951 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
LdlrP35951 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LdlrP35951 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
LdlrP35951 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.53■□□□□ 0.08
LdlrP35951 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
LdlrP35951 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.53■□□□□ 0.08
LdlrP35951 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.53■□□□□ 0.08
LdlrP35951 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.53■□□□□ 0.08
LdlrP35951 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.53■□□□□ 0.08
LdlrP35951 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LdlrP35951 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
LdlrP35951 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LdlrP35951 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.53■□□□□ 0.08
LdlrP35951 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LdlrP35951 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LdlrP35951 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LdlrP35951 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.52■□□□□ 0.08
LdlrP35951 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LdlrP35951 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LdlrP35951 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LdlrP35951 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LdlrP35951 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.52■□□□□ 0.08
LdlrP35951 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LdlrP35951 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LdlrP35951 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LdlrP35951 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.52■□□□□ 0.08
LdlrP35951 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.52■□□□□ 0.08
LdlrP35951 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LdlrP35951 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LdlrP35951 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LdlrP35951 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LdlrP35951 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LdlrP35951 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LdlrP35951 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.52■□□□□ 0.07
LdlrP35951 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
LdlrP35951 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LdlrP35951 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LdlrP35951 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LdlrP35951 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LdlrP35951 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LdlrP35951 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LdlrP35951 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LdlrP35951 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.51■□□□□ 0.07
LdlrP35951 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LdlrP35951 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.51■□□□□ 0.07
LdlrP35951 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LdlrP35951 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.51■□□□□ 0.07
LdlrP35951 Olfr129-201ENSMUST00000122318 993 ntBASIC15.51■□□□□ 0.07
LdlrP35951 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.51■□□□□ 0.07
LdlrP35951 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.51■□□□□ 0.07
LdlrP35951 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
LdlrP35951 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LdlrP35951 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms