Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rom1P32958 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.37□□□□□ -0.43
Rom1P32958 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rom1P32958 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rom1P32958 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rom1P32958 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rom1P32958 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Rom1P32958 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rom1P32958 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.36□□□□□ -0.43
Rom1P32958 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rom1P32958 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rom1P32958 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rom1P32958 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.35□□□□□ -0.43
Rom1P32958 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Gm12441-201ENSMUST00000121806 588 ntBASIC12.35□□□□□ -0.43
Rom1P32958 Gm13474-201ENSMUST00000122466 815 ntBASIC12.35□□□□□ -0.43
Rom1P32958 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.35□□□□□ -0.43
Rom1P32958 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Rom1P32958 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rom1P32958 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rom1P32958 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Rom1P32958 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Rom1P32958 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.35□□□□□ -0.43
Rom1P32958 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rom1P32958 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.35□□□□□ -0.43
Rom1P32958 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rom1P32958 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.34□□□□□ -0.43
Rom1P32958 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.34□□□□□ -0.43
Rom1P32958 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.34□□□□□ -0.43
Rom1P32958 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rom1P32958 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms