Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Slc6a1P31648 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Slc6a1P31648 Gm38027-201ENSMUST00000192315 235 ntBASIC13.46□□□□□ -0.25
Slc6a1P31648 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Slc6a1P31648 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Slc6a1P31648 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Slc6a1P31648 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Slc6a1P31648 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Slc6a1P31648 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Slc6a1P31648 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Slc6a1P31648 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Slc6a1P31648 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Slc6a1P31648 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Slc6a1P31648 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Slc6a1P31648 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Slc6a1P31648 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Slc6a1P31648 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Slc6a1P31648 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.45□□□□□ -0.26
Slc6a1P31648 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.45□□□□□ -0.26
Slc6a1P31648 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Slc6a1P31648 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Slc6a1P31648 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.45□□□□□ -0.26
Slc6a1P31648 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.45□□□□□ -0.26
Slc6a1P31648 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.45□□□□□ -0.26
Slc6a1P31648 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Slc6a1P31648 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Slc6a1P31648 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.44□□□□□ -0.26
Slc6a1P31648 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.44□□□□□ -0.26
Slc6a1P31648 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.44□□□□□ -0.26
Slc6a1P31648 Gm10231-201ENSMUST00000181584 441 ntBASIC13.44□□□□□ -0.26
Slc6a1P31648 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Gm10175-202ENSMUST00000208752 441 ntBASIC13.44□□□□□ -0.26
Slc6a1P31648 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Slc6a1P31648 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Slc6a1P31648 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Slc6a1P31648 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Slc6a1P31648 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.43□□□□□ -0.26
Slc6a1P31648 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.43□□□□□ -0.26
Slc6a1P31648 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Slc6a1P31648 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.43□□□□□ -0.26
Slc6a1P31648 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms