Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
Cdx1P18111 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cdx1P18111 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdx1P18111 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdx1P18111 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.64□□□□□ -0.39
Cdx1P18111 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdx1P18111 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.64□□□□□ -0.39
Cdx1P18111 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Gm10819-201ENSMUST00000099988 561 ntBASIC12.64□□□□□ -0.39
Cdx1P18111 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdx1P18111 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx1P18111 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.64□□□□□ -0.39
Cdx1P18111 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdx1P18111 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdx1P18111 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdx1P18111 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.63□□□□□ -0.39
Cdx1P18111 Gm18101-201ENSMUST00000215769 548 ntBASIC12.63□□□□□ -0.39
Cdx1P18111 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdx1P18111 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdx1P18111 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Cdx1P18111 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdx1P18111 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdx1P18111 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Cdx1P18111 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdx1P18111 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Cdx1P18111 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdx1P18111 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cdx1P18111 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdx1P18111 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdx1P18111 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx1P18111 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms