Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Gm7889-201ENSMUST00000185591 958 ntBASIC12.93□□□□□ -0.34
Cxcl1P12850 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.93□□□□□ -0.34
Cxcl1P12850 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.93□□□□□ -0.34
Cxcl1P12850 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.93□□□□□ -0.34
Cxcl1P12850 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl1P12850 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.92□□□□□ -0.34
Cxcl1P12850 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cxcl1P12850 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cxcl1P12850 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Gm7367-201ENSMUST00000057611 492 ntBASIC12.92□□□□□ -0.34
Cxcl1P12850 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl1P12850 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cxcl1P12850 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Cxcl1P12850 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cxcl1P12850 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cxcl1P12850 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cxcl1P12850 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.91□□□□□ -0.34
Cxcl1P12850 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.91□□□□□ -0.34
Cxcl1P12850 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.91□□□□□ -0.34
Cxcl1P12850 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl1P12850 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cxcl1P12850 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl1P12850 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl1P12850 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl1P12850 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl1P12850 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl1P12850 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl1P12850 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.9□□□□□ -0.34
Cxcl1P12850 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl1P12850 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl1P12850 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Cxcl1P12850 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
Cxcl1P12850 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Cxcl1P12850 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.9□□□□□ -0.34
Cxcl1P12850 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms