Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC10.78□□□□□ -0.68
Smim1P0C8K7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smim1P0C8K7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smim1P0C8K7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smim1P0C8K7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smim1P0C8K7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Smim1P0C8K7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smim1P0C8K7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Smim1P0C8K7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Smim1P0C8K7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smim1P0C8K7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.77□□□□□ -0.69
Smim1P0C8K7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Rps24-207ENSMUST00000224568 714 ntBASIC10.77□□□□□ -0.69
Smim1P0C8K7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.77□□□□□ -0.69
Smim1P0C8K7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smim1P0C8K7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.76□□□□□ -0.69
Smim1P0C8K7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Gm8784-201ENSMUST00000222096 1435 ntBASIC10.76□□□□□ -0.69
Smim1P0C8K7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smim1P0C8K7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms