Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.4□□□□□ -0.1
P06336 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
P06336 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.4□□□□□ -0.1
P06336 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
P06336 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.39□□□□□ -0.11
P06336 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.39□□□□□ -0.11
P06336 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.39□□□□□ -0.11
P06336 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.39□□□□□ -0.11
P06336 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
P06336 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
P06336 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.39□□□□□ -0.11
P06336 Dancr-204ENSMUST00000132389 2347 ntBASIC14.39□□□□□ -0.11
P06336 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.39□□□□□ -0.11
P06336 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P06336 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.38□□□□□ -0.11
P06336 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.38□□□□□ -0.11
P06336 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.38□□□□□ -0.11
P06336 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
P06336 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06336 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.38□□□□□ -0.11
P06336 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.38□□□□□ -0.11
P06336 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
P06336 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.37□□□□□ -0.11
P06336 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
P06336 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Gm25990-201ENSMUST00000102440 86 ntBASIC14.37□□□□□ -0.11
P06336 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.37□□□□□ -0.11
P06336 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.37□□□□□ -0.11
P06336 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
P06336 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
P06336 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
P06336 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
P06336 Grk6-207ENSMUST00000225925 2769 ntBASIC14.37□□□□□ -0.11
P06336 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06336 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
P06336 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06336 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms