Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Gm4974-201ENSMUST00000209974 875 ntBASIC11.03□□□□□ -0.64
Hbb-b1P02088 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Hbb-b1P02088 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hbb-b1P02088 Gm43034-201ENSMUST00000198678 1364 ntBASIC11.03□□□□□ -0.64
Hbb-b1P02088 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Hbb-b1P02088 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Gm37025-201ENSMUST00000195159 829 ntBASIC11.02□□□□□ -0.65
Hbb-b1P02088 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.02□□□□□ -0.65
Hbb-b1P02088 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hbb-b1P02088 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hbb-b1P02088 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.01□□□□□ -0.65
Hbb-b1P02088 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.01□□□□□ -0.65
Hbb-b1P02088 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Gm11927-201ENSMUST00000118472 759 ntBASIC11.01□□□□□ -0.65
Hbb-b1P02088 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hbb-b1P02088 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms