Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
P01788 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
P01788 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
P01788 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.35□□□□□ -0.43
P01788 Gm27389-201ENSMUST00000183622 195 ntBASIC12.35□□□□□ -0.43
P01788 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.35□□□□□ -0.43
P01788 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Gm44430-201ENSMUST00000203376 995 ntBASIC12.35□□□□□ -0.43
P01788 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.35□□□□□ -0.43
P01788 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
P01788 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.35□□□□□ -0.43
P01788 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
P01788 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01788 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
P01788 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
P01788 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.34□□□□□ -0.43
P01788 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.34□□□□□ -0.43
P01788 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.34□□□□□ -0.43
P01788 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
P01788 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P01788 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
P01788 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
P01788 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
P01788 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
P01788 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
P01788 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.33□□□□□ -0.44
P01788 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
P01788 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
P01788 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.33□□□□□ -0.44
P01788 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.33□□□□□ -0.44
P01788 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.33□□□□□ -0.44
P01788 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
P01788 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.33□□□□□ -0.44
P01788 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.33□□□□□ -0.44
P01788 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.33□□□□□ -0.44
P01788 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
P01788 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
P01788 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
P01788 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P01788 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01788 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01788 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms