Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.37□□□□□ -0.27
Cldn1O88551 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cldn1O88551 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cldn1O88551 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.37□□□□□ -0.27
Cldn1O88551 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cldn1O88551 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Cldn1O88551 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.36□□□□□ -0.27
Cldn1O88551 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Gm11764-201ENSMUST00000120221 623 ntBASIC13.36□□□□□ -0.27
Cldn1O88551 Gm13616-201ENSMUST00000120600 222 ntBASIC13.36□□□□□ -0.27
Cldn1O88551 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.36□□□□□ -0.27
Cldn1O88551 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Cldn1O88551 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.36□□□□□ -0.27
Cldn1O88551 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cldn1O88551 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.36□□□□□ -0.27
Cldn1O88551 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.36□□□□□ -0.27
Cldn1O88551 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.36□□□□□ -0.27
Cldn1O88551 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cldn1O88551 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cldn1O88551 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldn1O88551 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.36□□□□□ -0.27
Cldn1O88551 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cldn1O88551 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cldn1O88551 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cldn1O88551 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cldn1O88551 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.35□□□□□ -0.27
Cldn1O88551 AA543401-201ENSMUST00000164248 1269 ntBASIC13.35□□□□□ -0.27
Cldn1O88551 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.35□□□□□ -0.27
Cldn1O88551 Gm27300-201ENSMUST00000184085 97 ntBASIC13.35□□□□□ -0.27
Cldn1O88551 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.35□□□□□ -0.27
Cldn1O88551 Gm27335-201ENSMUST00000184758 97 ntBASIC13.35□□□□□ -0.27
Cldn1O88551 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.35□□□□□ -0.27
Cldn1O88551 Gm45167-201ENSMUST00000208007 322 ntBASIC13.35□□□□□ -0.27
Cldn1O88551 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.35□□□□□ -0.27
Cldn1O88551 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldn1O88551 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.34□□□□□ -0.27
Cldn1O88551 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.34□□□□□ -0.27
Cldn1O88551 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cldn1O88551 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.34□□□□□ -0.27
Cldn1O88551 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.34□□□□□ -0.27
Cldn1O88551 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.34□□□□□ -0.27
Cldn1O88551 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldn1O88551 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cldn1O88551 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cldn1O88551 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cldn1O88551 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms