Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.97□□□□□ -0.17
Col5a1O88207 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Col5a1O88207 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Gm16198-201ENSMUST00000118766 670 ntBASIC13.97□□□□□ -0.17
Col5a1O88207 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.97□□□□□ -0.17
Col5a1O88207 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col5a1O88207 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.97□□□□□ -0.17
Col5a1O88207 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.97□□□□□ -0.17
Col5a1O88207 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.96□□□□□ -0.17
Col5a1O88207 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.96□□□□□ -0.17
Col5a1O88207 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col5a1O88207 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Gm12490-201ENSMUST00000120255 560 ntBASIC13.96□□□□□ -0.17
Col5a1O88207 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.96□□□□□ -0.17
Col5a1O88207 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Col5a1O88207 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col5a1O88207 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col5a1O88207 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col5a1O88207 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col5a1O88207 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col5a1O88207 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col5a1O88207 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.95□□□□□ -0.18
Col5a1O88207 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.95□□□□□ -0.18
Col5a1O88207 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Col5a1O88207 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.95□□□□□ -0.18
Col5a1O88207 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col5a1O88207 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col5a1O88207 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.94□□□□□ -0.18
Col5a1O88207 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Gm27618-201ENSMUST00000183671 60 ntBASIC13.94□□□□□ -0.18
Col5a1O88207 Gm43433-201ENSMUST00000196573 481 ntBASIC13.94□□□□□ -0.18
Col5a1O88207 Gm7730-201ENSMUST00000212486 454 ntBASIC13.94□□□□□ -0.18
Col5a1O88207 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col5a1O88207 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.94□□□□□ -0.18
Col5a1O88207 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col5a1O88207 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Gm10499-201ENSMUST00000174094 934 ntBASIC13.94□□□□□ -0.18
Col5a1O88207 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Col5a1O88207 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.94□□□□□ -0.18
Col5a1O88207 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.94□□□□□ -0.18
Col5a1O88207 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col5a1O88207 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col5a1O88207 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.94□□□□□ -0.18
Col5a1O88207 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col5a1O88207 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col5a1O88207 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col5a1O88207 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col5a1O88207 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col5a1O88207 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col5a1O88207 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.93□□□□□ -0.18
Col5a1O88207 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms