Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.15■□□□□ 0.34
Prom1O54990 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.15■□□□□ 0.34
Prom1O54990 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Prom1O54990 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prom1O54990 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Prom1O54990 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prom1O54990 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Prom1O54990 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.15■□□□□ 0.34
Prom1O54990 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Prom1O54990 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prom1O54990 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Prom1O54990 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.14■□□□□ 0.33
Prom1O54990 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Prom1O54990 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.14■□□□□ 0.33
Prom1O54990 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Rpph1-201ENSMUST00000175096 319 ntBASIC17.14■□□□□ 0.33
Prom1O54990 Gm8318-201ENSMUST00000182954 872 ntBASIC17.14■□□□□ 0.33
Prom1O54990 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.14■□□□□ 0.33
Prom1O54990 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Prom1O54990 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.14■□□□□ 0.33
Prom1O54990 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prom1O54990 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.13■□□□□ 0.33
Prom1O54990 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.13■□□□□ 0.33
Prom1O54990 AA543401-201ENSMUST00000164248 1269 ntBASIC17.13■□□□□ 0.33
Prom1O54990 Gm10499-201ENSMUST00000174094 934 ntBASIC17.13■□□□□ 0.33
Prom1O54990 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Prom1O54990 Gm43474-201ENSMUST00000196415 774 ntBASIC17.13■□□□□ 0.33
Prom1O54990 Gm5312-201ENSMUST00000203728 547 ntBASIC17.13■□□□□ 0.33
Prom1O54990 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.13■□□□□ 0.33
Prom1O54990 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.13■□□□□ 0.33
Prom1O54990 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.13■□□□□ 0.33
Prom1O54990 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.13■□□□□ 0.33
Prom1O54990 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Prom1O54990 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prom1O54990 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.12■□□□□ 0.33
Prom1O54990 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.12■□□□□ 0.33
Prom1O54990 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.12■□□□□ 0.33
Prom1O54990 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Prom1O54990 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.12■□□□□ 0.33
Prom1O54990 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prom1O54990 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Prom1O54990 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.11■□□□□ 0.33
Prom1O54990 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.11■□□□□ 0.33
Prom1O54990 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Prom1O54990 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Prom1O54990 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.11■□□□□ 0.33
Prom1O54990 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Prom1O54990 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Prom1O54990 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Gm18889-201ENSMUST00000174284 929 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms