Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Efnb3O35393 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Efnb3O35393 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Efnb3O35393 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.36□□□□□ -0.43
Efnb3O35393 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Efnb3O35393 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Efnb3O35393 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Efnb3O35393 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.36□□□□□ -0.43
Efnb3O35393 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Efnb3O35393 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Efnb3O35393 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Mir7071-201ENSMUST00000184847 69 ntBASIC12.36□□□□□ -0.43
Efnb3O35393 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.36□□□□□ -0.43
Efnb3O35393 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.36□□□□□ -0.43
Efnb3O35393 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.36□□□□□ -0.43
Efnb3O35393 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Efnb3O35393 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.35□□□□□ -0.43
Efnb3O35393 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Efnb3O35393 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.35□□□□□ -0.43
Efnb3O35393 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.35□□□□□ -0.43
Efnb3O35393 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Efnb3O35393 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.35□□□□□ -0.43
Efnb3O35393 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.35□□□□□ -0.43
Efnb3O35393 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Efnb3O35393 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Efnb3O35393 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Efnb3O35393 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.35□□□□□ -0.43
Efnb3O35393 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Efnb3O35393 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.35□□□□□ -0.43
Efnb3O35393 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Efnb3O35393 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Efnb3O35393 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.34□□□□□ -0.43
Efnb3O35393 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.34□□□□□ -0.43
Efnb3O35393 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.34□□□□□ -0.43
Efnb3O35393 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Efnb3O35393 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.34□□□□□ -0.43
Efnb3O35393 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms