Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.45□□□□□ -0.1
Capn1O35350 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.45□□□□□ -0.1
Capn1O35350 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.45□□□□□ -0.1
Capn1O35350 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.45□□□□□ -0.1
Capn1O35350 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.45□□□□□ -0.1
Capn1O35350 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.45□□□□□ -0.1
Capn1O35350 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Capn1O35350 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.45□□□□□ -0.1
Capn1O35350 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Capn1O35350 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Capn1O35350 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Capn1O35350 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Capn1O35350 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Capn1O35350 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.44□□□□□ -0.1
Capn1O35350 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Gm12497-201ENSMUST00000138778 237 ntBASIC14.44□□□□□ -0.1
Capn1O35350 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Capn1O35350 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.44□□□□□ -0.1
Capn1O35350 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Capn1O35350 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.44□□□□□ -0.1
Capn1O35350 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.44□□□□□ -0.1
Capn1O35350 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.44□□□□□ -0.1
Capn1O35350 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Capn1O35350 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.44□□□□□ -0.1
Capn1O35350 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Capn1O35350 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Capn1O35350 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Capn1O35350 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Capn1O35350 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Capn1O35350 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.43□□□□□ -0.1
Capn1O35350 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.43□□□□□ -0.1
Capn1O35350 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Gm7230-201ENSMUST00000173026 815 ntBASIC14.43□□□□□ -0.1
Capn1O35350 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.43□□□□□ -0.1
Capn1O35350 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.43□□□□□ -0.1
Capn1O35350 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.43□□□□□ -0.1
Capn1O35350 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Capn1O35350 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Capn1O35350 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.43□□□□□ -0.1
Capn1O35350 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Capn1O35350 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.42□□□□□ -0.1
Capn1O35350 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Capn1O35350 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Gm4459-201ENSMUST00000118750 468 ntBASIC14.42□□□□□ -0.1
Capn1O35350 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Capn1O35350 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.42□□□□□ -0.1
Capn1O35350 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms