Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Hfm1D3Z4R1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Gm15321-201ENSMUST00000121290 288 ntBASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Gm27838-201ENSMUST00000184829 128 ntBASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Gm44344-201ENSMUST00000200287 129 ntBASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 AC124732.1-201ENSMUST00000221551 910 ntBASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hfm1D3Z4R1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Gm14127-201ENSMUST00000117906 678 ntBASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Gm24694-201ENSMUST00000180054 110 ntBASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Gm27663-201ENSMUST00000184839 110 ntBASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Gm44729-201ENSMUST00000206759 2052 ntBASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Hfm1D3Z4R1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Hfm1D3Z4R1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 CT010506.4-201ENSMUST00000225457 351 ntBASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
Hfm1D3Z4R1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hfm1D3Z4R1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hfm1D3Z4R1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC21.65■■□□□ 1.06
Hfm1D3Z4R1 Gm8597-201ENSMUST00000191525 1109 ntBASIC21.65■■□□□ 1.06
Hfm1D3Z4R1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC21.65■■□□□ 1.06
Hfm1D3Z4R1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Hfm1D3Z4R1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hfm1D3Z4R1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hfm1D3Z4R1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hfm1D3Z4R1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hfm1D3Z4R1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Hfm1D3Z4R1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC21.64■■□□□ 1.06
Hfm1D3Z4R1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hfm1D3Z4R1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Hfm1D3Z4R1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Hfm1D3Z4R1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hfm1D3Z4R1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Hfm1D3Z4R1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hfm1D3Z4R1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hfm1D3Z4R1 Gm14026-201ENSMUST00000120625 1789 ntBASIC21.64■■□□□ 1.05
Hfm1D3Z4R1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hfm1D3Z4R1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms