Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.55□□□□□ -0.08
IsxA1A546 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
IsxA1A546 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
IsxA1A546 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IsxA1A546 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.54□□□□□ -0.08
IsxA1A546 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
IsxA1A546 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
IsxA1A546 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
IsxA1A546 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.54□□□□□ -0.08
IsxA1A546 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
IsxA1A546 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.54□□□□□ -0.08
IsxA1A546 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.54□□□□□ -0.08
IsxA1A546 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.54□□□□□ -0.08
IsxA1A546 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.54□□□□□ -0.08
IsxA1A546 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
IsxA1A546 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
IsxA1A546 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IsxA1A546 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
IsxA1A546 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
IsxA1A546 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
IsxA1A546 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.53□□□□□ -0.08
IsxA1A546 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.53□□□□□ -0.08
IsxA1A546 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
IsxA1A546 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
IsxA1A546 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
IsxA1A546 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IsxA1A546 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
IsxA1A546 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IsxA1A546 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IsxA1A546 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IsxA1A546 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
IsxA1A546 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
IsxA1A546 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
IsxA1A546 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IsxA1A546 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IsxA1A546 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.52□□□□□ -0.08
IsxA1A546 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IsxA1A546 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IsxA1A546 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.52□□□□□ -0.09
IsxA1A546 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.52□□□□□ -0.09
IsxA1A546 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.52□□□□□ -0.09
IsxA1A546 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.52□□□□□ -0.09
IsxA1A546 Gm37055-201ENSMUST00000191866 133 ntBASIC14.52□□□□□ -0.09
IsxA1A546 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IsxA1A546 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
IsxA1A546 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
IsxA1A546 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IsxA1A546 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
IsxA1A546 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms