Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Cfap99A0A140LIX9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Gm25406-201ENSMUST00000157599 105 ntBASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cfap99A0A140LIX9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cfap99A0A140LIX9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cfap99A0A140LIX9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cfap99A0A140LIX9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cfap99A0A140LIX9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Gm14822-201ENSMUST00000122247 291 ntBASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cfap99A0A140LIX9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cfap99A0A140LIX9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.6■□□□□ 0.57
Cfap99A0A140LIX9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms