Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm18733-201ENSMUST00000173950 856 ntBASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13n-1A0A0G2JEU8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms