Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Mir6404-201ENSMUST00000183699 94 ntBASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ighv1-56A0A0A6YXG2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms