Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm28659-201ENSMUST00000188013 759 ntBASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Gm7506-201ENSMUST00000207758 815 ntBASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Rps4l-201ENSMUST00000071745 943 ntBASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbc1A0A0A6YWV4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbc1A0A0A6YWV4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Trbc1A0A0A6YWV4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbc1A0A0A6YWV4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trbc1A0A0A6YWV4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trbc1A0A0A6YWV4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm4459-201ENSMUST00000118750 468 ntBASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.33□□□□□ -0.12
Trbc1A0A0A6YWV4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbc1A0A0A6YWV4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms