Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-3A0A075B6A4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm42545-201ENSMUST00000202755 922 ntBASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-3A0A075B6A4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Rab3c-203ENSMUST00000224180 967 ntBASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-3A0A075B6A4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-3A0A075B6A4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms