Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Gm10231-201ENSMUST00000181584 441 ntBASIC12.81□□□□□ -0.36
Trav18A0A075B656 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Gm5587-201ENSMUST00000206270 674 ntBASIC12.81□□□□□ -0.36
Trav18A0A075B656 Gm10175-202ENSMUST00000208752 441 ntBASIC12.81□□□□□ -0.36
Trav18A0A075B656 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav18A0A075B656 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 BC037039-201ENSMUST00000192003 2205 ntBASIC12.8□□□□□ -0.36
Trav18A0A075B656 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.8□□□□□ -0.36
Trav18A0A075B656 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav18A0A075B656 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.79□□□□□ -0.36
Trav18A0A075B656 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav18A0A075B656 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms