Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Wnt10b-204ENSMUST00000226655 1807 ntBASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Gm5408-201ENSMUST00000197998 747 ntBASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav3-4A0A075B654 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-4A0A075B654 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-4A0A075B654 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-4A0A075B654 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.52□□□□□ -0.72
Trav3-4A0A075B654 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav3-4A0A075B654 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Trav3-4A0A075B654 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Gm10654-201ENSMUST00000098653 1633 ntBASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms