Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44357-201ENSMUST00000195897 142 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm19658-201ENSMUST00000196231 138 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44367-201ENSMUST00000196836 138 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44350-201ENSMUST00000197197 138 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44390-201ENSMUST00000197533 144 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44313-201ENSMUST00000198018 138 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44486-201ENSMUST00000198508 138 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44314-201ENSMUST00000199263 138 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44394-201ENSMUST00000199558 138 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44484-201ENSMUST00000199873 138 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44466-201ENSMUST00000200264 138 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Gm44359-201ENSMUST00000200671 138 ntBASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13-1A0A075B644 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Gm12497-201ENSMUST00000138778 237 ntBASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Gm9172-201ENSMUST00000212092 954 ntBASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-1A0A075B644 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Gm6296-201ENSMUST00000222599 943 ntBASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-1A0A075B644 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms