Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4-2A0A075B638 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Gm12441-201ENSMUST00000121806 588 ntBASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Mir6404-201ENSMUST00000183699 94 ntBASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Gm3375-201ENSMUST00000203929 796 ntBASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav4-2A0A075B638 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms