Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gm27389-201ENSMUST00000183622 195 ntBASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 BC037039-201ENSMUST00000192003 2205 ntBASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.27□□□□□ -0.28
Trav15d-1-dv6d-1A0A075B624 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav15d-1-dv6d-1A0A075B624 Gm37055-201ENSMUST00000191866 133 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms