Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Gm9731-201ENSMUST00000209480 747 ntBASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4n-4A0A075B615 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Gm10517-202ENSMUST00000192970 758 ntBASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Gm9694-201ENSMUST00000193347 1189 ntBASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4n-4A0A075B615 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Trav4n-4A0A075B615 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.83□□□□□ -0.67
Trav4n-4A0A075B615 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Gm7290-201ENSMUST00000104990 617 ntBASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Gm12918-201ENSMUST00000120234 636 ntBASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Gm15710-201ENSMUST00000121821 636 ntBASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Gm5075-201ENSMUST00000196916 622 ntBASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4n-4A0A075B615 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms