Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13d-1A0A075B606 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Gm6443-201ENSMUST00000203599 874 ntBASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Gm6296-201ENSMUST00000222599 943 ntBASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-1A0A075B606 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-1A0A075B606 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Gm43514-201ENSMUST00000198852 424 ntBASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Gm2651-201ENSMUST00000203560 838 ntBASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-1A0A075B606 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav13d-1A0A075B606 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms