Protein–RNA interactions for Protein: Q9Z0E3

Aire, Autoimmune regulator, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AireQ9Z0E3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AireQ9Z0E3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AireQ9Z0E3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AireQ9Z0E3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AireQ9Z0E3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AireQ9Z0E3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AireQ9Z0E3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AireQ9Z0E3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AireQ9Z0E3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AireQ9Z0E3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AireQ9Z0E3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AireQ9Z0E3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
AireQ9Z0E3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
AireQ9Z0E3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AireQ9Z0E3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AireQ9Z0E3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AireQ9Z0E3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AireQ9Z0E3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AireQ9Z0E3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AireQ9Z0E3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AireQ9Z0E3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Olfr129-201ENSMUST00000122318 993 ntBASIC14.02□□□□□ -0.17
AireQ9Z0E3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.02□□□□□ -0.17
AireQ9Z0E3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.02□□□□□ -0.17
AireQ9Z0E3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AireQ9Z0E3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AireQ9Z0E3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AireQ9Z0E3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14□□□□□ -0.17
AireQ9Z0E3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14□□□□□ -0.17
AireQ9Z0E3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 AC133598.3-202ENSMUST00000224219 531 ntBASIC14□□□□□ -0.17
AireQ9Z0E3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AireQ9Z0E3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms