Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CcsQ9WU84 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcsQ9WU84 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CcsQ9WU84 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.19□□□□□ -0.46
CcsQ9WU84 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.19□□□□□ -0.46
CcsQ9WU84 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.19□□□□□ -0.46
CcsQ9WU84 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.19□□□□□ -0.46
CcsQ9WU84 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CcsQ9WU84 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcsQ9WU84 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.18□□□□□ -0.46
CcsQ9WU84 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.18□□□□□ -0.46
CcsQ9WU84 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CcsQ9WU84 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.18□□□□□ -0.46
CcsQ9WU84 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.18□□□□□ -0.46
CcsQ9WU84 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.18□□□□□ -0.46
CcsQ9WU84 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.18□□□□□ -0.46
CcsQ9WU84 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.18□□□□□ -0.46
CcsQ9WU84 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CcsQ9WU84 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcsQ9WU84 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.18□□□□□ -0.46
CcsQ9WU84 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.17□□□□□ -0.46
CcsQ9WU84 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.17□□□□□ -0.46
CcsQ9WU84 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
CcsQ9WU84 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.17□□□□□ -0.46
CcsQ9WU84 Gm10231-201ENSMUST00000181584 441 ntBASIC12.17□□□□□ -0.46
CcsQ9WU84 Gm7889-201ENSMUST00000185591 958 ntBASIC12.17□□□□□ -0.46
CcsQ9WU84 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Gm10175-202ENSMUST00000208752 441 ntBASIC12.17□□□□□ -0.46
CcsQ9WU84 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.17□□□□□ -0.46
CcsQ9WU84 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CcsQ9WU84 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.17□□□□□ -0.46
CcsQ9WU84 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CcsQ9WU84 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CcsQ9WU84 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
CcsQ9WU84 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcsQ9WU84 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms