Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh17Q9R100 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh17Q9R100 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh17Q9R100 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh17Q9R100 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh17Q9R100 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh17Q9R100 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.24■□□□□ 0.03
Cdh17Q9R100 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.24■□□□□ 0.03
Cdh17Q9R100 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.24■□□□□ 0.03
Cdh17Q9R100 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh17Q9R100 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdh17Q9R100 AA414768-201ENSMUST00000121924 1257 ntBASIC15.23■□□□□ 0.03
Cdh17Q9R100 Gm6659-201ENSMUST00000174752 547 ntBASIC15.23■□□□□ 0.03
Cdh17Q9R100 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh17Q9R100 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Mir3081-201ENSMUST00000175305 84 ntBASIC15.22■□□□□ 0.03
Cdh17Q9R100 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.22■□□□□ 0.03
Cdh17Q9R100 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
Cdh17Q9R100 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms