Protein–RNA interactions for Protein: Q9R078

Prkab1, 5'-AMP-activated protein kinase subunit beta-1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prkab1Q9R078 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prkab1Q9R078 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prkab1Q9R078 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.83■□□□□ 0.44
Prkab1Q9R078 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Prkab1Q9R078 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.83■□□□□ 0.44
Prkab1Q9R078 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prkab1Q9R078 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Prkab1Q9R078 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Gm5177-201ENSMUST00000183092 997 ntBASIC17.81■□□□□ 0.44
Prkab1Q9R078 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Gm18246-201ENSMUST00000221023 728 ntBASIC17.81■□□□□ 0.44
Prkab1Q9R078 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.81■□□□□ 0.44
Prkab1Q9R078 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prkab1Q9R078 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.8■□□□□ 0.44
Prkab1Q9R078 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.8■□□□□ 0.44
Prkab1Q9R078 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prkab1Q9R078 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.79■□□□□ 0.44
Prkab1Q9R078 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.79■□□□□ 0.44
Prkab1Q9R078 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.79■□□□□ 0.44
Prkab1Q9R078 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.79■□□□□ 0.44
Prkab1Q9R078 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.79■□□□□ 0.44
Prkab1Q9R078 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.79■□□□□ 0.44
Prkab1Q9R078 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prkab1Q9R078 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prkab1Q9R078 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Prkab1Q9R078 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.78■□□□□ 0.44
Prkab1Q9R078 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prkab1Q9R078 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms