Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Gm13436-201ENSMUST00000120418 567 ntBASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Gm27011-201ENSMUST00000182352 972 ntBASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm4Q9QXA5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm4Q9QXA5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm4Q9QXA5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.43
Lsm4Q9QXA5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms