Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Gm42569-201ENSMUST00000200539 472 ntBASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.67□□□□□ -0.38
Rhox4bQ9JI43 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rhox4bQ9JI43 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.65□□□□□ -0.38
Rhox4bQ9JI43 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rhox4bQ9JI43 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rhox4bQ9JI43 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rhox4bQ9JI43 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.64□□□□□ -0.39
Rhox4bQ9JI43 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms